Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTAGCTTCCCTTGCAGCTGCAAT
((((((((((((..((..(((&)))...))..))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385175
GeneSymbolUSP36
Binding site4365,4391
Score1.0
Seed1
Au0.426
Energy-22.0
Binding len26
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure