Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAGGCAGCACCGGCTGCC
..(((((((..(((((..(((&)))....)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385204
GeneSymbolTYK2
Binding site3067,3089
Score0.846
Seed1
Au0.353
Energy-21.4
Binding len22
Me-9.024
Phylopstem2.0650935714285716
Phylopflank2.3130117712500002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure