Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGAAATGCAGCTGTGGA
(((((((((((......(((.&))).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352015
GeneSymbolSLC35F4
Binding site1217,1237
Score0.846
Seed1
Au0.5
Energy-18.9
Binding len20
Me-10.399
Phylopstem5.2280130854545455
Phylopflank5.7491166292499996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure