Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCTCTGTATGTCAGGTG
((((((((((((..((......&))..)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330576
GeneSymbolCDH11
Binding site5439,5456
Score0.923
Seed1
Au0.588
Energy-20.3
Binding len17
Me-6.084
Phylopstem5.78708575
Phylopflank4.20254652625
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure