Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTAAAATGCGGCTGCGT
.((((((((((......(((.&)))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385260
GeneSymbolPTP4A1
Binding site948,966
Score0.846
Seed1
Au0.588
Energy-18.6
Binding len18
Me-10.255
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure