Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTTCTGTACTGCCAGTGG
.(((((((((((..(((((...&)))))...)))).)))))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001385284
GeneSymbolKIT
Binding site1411,1433
Score0.923
Seed1
Au0.485
Energy-18.0
Binding len22
Me-5.939
Phylopstem-0.03704076153846154
Phylopflank-0.20043788037499996
Longest consecutive pairings6
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure