Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCTCAGAGAGGAGCTG
....((((((((((((((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352027
GeneSymbolPHF21A
Binding site5545,5564
Score0.949
Seed0
Au0.426
Energy-28.6
Binding len19
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure