Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCAGCCTCCAGCTGGCAC
.((((((((.((((((.(((.&))).))))))..)))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352027
GeneSymbolPHF21A
Binding site6363,6385
Score0.846
Seed1
Au0.309
Energy-22.8
Binding len22
Me-5.036
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings12
Pairings in 3prime end6
Position3UTR
2D Structure