Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCTCAGGGGAAGGAGCTGGA
..((((((((((((((((.(((&))))))))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001330576
GeneSymbolCDH11
Binding site353,375
Score0.846
Seed1
Au0.588
Energy-23.5
Binding len22
Me-4.957
Phylopstem-0.07323525555555555
Phylopflank-0.16845200874999994
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure