Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCAGAACATGCCGGGA
.((((((((....((((.(...&).))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001385411
GeneSymbolNBPF15
Binding site3356,3375
Score0.846
Seed1
Au0.559
Energy-17.4
Binding len19
Me-12.497
Phylopstem-0.28307075000000004
Phylopflank-0.060712473625000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure