Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACAACTGCAGAATGTAGA
(((((.((((((((((..(((&)))..))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385411
GeneSymbolNBPF15
Binding site3920,3943
Score1.0
Seed0
Au0.529
Energy-23.0
Binding len23
Me-5.839
Phylopstem-0.43983279999999986
Phylopflank0.01010876249999998
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure