Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCAGAACATGCCGGGA
.((((((((....((((.(...&).))))....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001385442
GeneSymbolNBPF15
Binding site3339,3358
Score0.846
Seed1
Au0.559
Energy-17.4
Binding len19
Me-12.497
Phylopstem-0.25706475
Phylopflank-0.08115504287499994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure