Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACAACTGCAGAATGTAGA
(((((.((((((((((..(((&)))..))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385442
GeneSymbolNBPF15
Binding site3903,3926
Score1.0
Seed0
Au0.529
Energy-23.0
Binding len23
Me-5.839
Phylopstem0.0656786
Phylopflank0.035347925
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure