Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCCAGTTGGGAT
((.(((((((((((((.....&)))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385442
GeneSymbolNBPF15
Binding site995,1013
Score0.846
Seed0
Au0.529
Energy-21.3
Binding len18
Me-5.495
Phylopstem0.08598442857142853
Phylopflank-0.06680313750000004
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end3
Position5UTR
2D Structure