Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGGAACGATGTTCACGGAGAAAATGACAACCACAGCTTCTGAAGCAAT
(((((((((.((((((.....&.)))))).)))))......)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385449
GeneSymbolRTL9
Binding site2102,2155
Score1.0
Seed1
Au0.544
Energy-18.9
Binding len24
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end3
PositionCDS
2D Structure