Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCTGGGCTGTGGA
((((((((.(((((((.((((&))))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352029
GeneSymbolPHF21A
Binding site5318,5338
Score0.923
Seed1
Au0.471
Energy-22.1
Binding len20
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings19
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure