Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAGAAGCGGCTTCTGCGT
.(((((((((..(((((((((&)))))))))..))))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385518
GeneSymbolCAPRIN2
Binding site385,409
Score0.846
Seed1
Au0.265
Energy-23.1
Binding len24
Me-9.965
Phylopstem5.358726666666667
Phylopflank4.37648468625
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end8
Position5UTR
2D Structure