Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGTGCAAGAGCAGCTGCT
..((((((((..(((((.(((&)))..)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385710
GeneSymbolSCAND1
Binding site1520,1541
Score0.846
Seed1
Au0.309
Energy-23.1
Binding len21
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure