Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTTGACCGCTATGTGGCCATCTGCAAG
(((((((((((((((.(((((&)))))))))))).....)))....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385736
GeneSymbolOR52K1
Binding site839,869
Score0.846
Seed1
Au0.412
Energy-19.7
Binding len30
Me-4.171
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings18
Pairings in 3prime end7
PositionCDS
2D Structure