Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGAGGACTGTGGATACAGCTGCAAC
((((((((((((((.(..(((&))).).)))))......))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385736
GeneSymbolOR52K1
Binding site72,99
Score0.846
Seed1
Au0.618
Energy-18.6
Binding len27
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure