Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAGGTCCAACCGCAGTAGACAGAAAGGGCTGAGGTCCATTTGTATGCAC
.((((((((((((((..((((&)))).......))))))))))............................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385922
GeneSymbolNPIPB8
Binding site591,645
Score0.923
Seed1
Au0.544
Energy-20.0
Binding len54
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings33
Pairings in 3prime end6
PositionCDS
2D Structure