Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGGCATCGCCAGTTCCATCCACTCAGCCGCAGCTCAC
.((.(((((((((((...((.&.))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001385950
GeneSymbolPLEKHA5
Binding site3388,3428
Score1.0
Seed0
Au0.471
Energy-23.4
Binding len20
Me-7.058
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure