Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTTAACCGAGGCTGTC
..((((((.((((((..(((.&)))..)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352071
GeneSymbolSUGP2
Binding site5815,5834
Score0.846
Seed1
Au0.324
Energy-20.3
Binding len19
Me-6.246
Phylopstem0.7378298666666666
Phylopflank1.38628654125
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure