Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGCTATTTGGCTTTGCAGAGCAGAAGCAGCTGCT
..((((((((..(((((((((&.))))))))).......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386028
GeneSymbolBSCL2
Binding site1208,1248
Score0.846
Seed1
Au0.471
Energy-23.6
Binding len26
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings16
Pairings in 3prime end8
PositionCDS
2D Structure