Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCTGGGTGTGGTAGCTCGTGGCTGTAAT
((((((((((((((((((((.&)))))...........)))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386082
GeneSymbolSPECC1
Binding site3657,3690
Score0.846
Seed1
Au0.441
Energy-20.2
Binding len33
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure