Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTGGCGACAGCAGCTGCC
..((((((((.(((((.((((&)).)).))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386083
GeneSymbolSPECC1
Binding site1149,1170
Score0.846
Seed1
Au0.456
Energy-23.6
Binding len21
Me-7.782
Phylopstem4.751194999999999
Phylopflank5.880155744999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure