Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCACATCCTCTACTGCTGCATTAAATACAGCTGCAGCTGCC
..(((((((((((((((....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352127
GeneSymbolCHD9
Binding site8482,8527
Score1.0
Seed1
Au0.559
Energy-27.8
Binding len17
Me-4.957
Phylopstem2.6555904666666668
Phylopflank2.90954615125
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure