Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGGCCTATGCAAGCTGCT
..((((((((((((.(((((.&))))).))))...))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386094
GeneSymbolAGBL1
Binding site3681,3704
Score0.846
Seed1
Au0.529
Energy-23.6
Binding len23
Me-5.692
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure