Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCCGCGCAGCTGGGAT
((.((((((((..((..((((&))))..)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386095
GeneSymbolOR4D1
Binding site1909,1929
Score0.846
Seed0
Au0.368
Energy-20.4
Binding len20
Me-10.364
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure