Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TAGCTGCTGTGCTGCAAA
(((((((.(((((((......&)))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386098
GeneSymbolOR3A3
Binding site701,719
Score0.808
Seed1
Au0.426
Energy-19.0
Binding len18
Me-6.484
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end2
PositionCDS
2D Structure