Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCAGAGGGCGGCTGTAC
.(((((((((..((((((((.&))).)))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386768
GeneSymbolDTNA
Binding site4235,4257
Score0.846
Seed1
Au0.441
Energy-20.8
Binding len22
Me-9.965
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure