Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCACCAGCTCTGCAGT
((((((..((((.((((((((&)))))))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386823
GeneSymbolB3GALT9
Binding site200,221
Score0.923
Seed0
Au0.574
Energy-19.5
Binding len21
Me-9.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end8
Position5UTR
2D Structure