Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCAGGCGGCTGCCAAGGCTGCGGA
((((((((((((((((..(((&)))....))))))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352260
GeneSymbolZNF536
Binding site1689,1716
Score0.923
Seed1
Au0.338
Energy-22.6
Binding len27
Me-3.938
Phylopstem3.8599608210526317
Phylopflank2.8841191075
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure