Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCCTTCACCTTGCCAGGTG
((((((((..............&.)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001386884
GeneSymbolPCDHGC4
Binding site1797,1818
Score0.846
Seed1
Au0.382
Energy-14.9
Binding len10
Me-15.523
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure