Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAATTCTCAGGGCTCTACCCCCCTTTCCTGGTCCTAGGTGGCCAGTGG
(((((((((((..(((((((((&.))))))).........))....))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352281
GeneSymbolRHOT2
Binding site2235,2288
Score0.846
Seed1
Au0.382
Energy-25.9
Binding len36
Me-8.574
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure