Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTCCGCAGCTGCC
..((((((((((..((.....&))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386936
GeneSymbolSIPA1L1
Binding site1638,1653
Score0.923
Seed1
Au0.412
Energy-24.3
Binding len15
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure