Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCAGCAGTA
.....(((((.((((((((((&)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386936
GeneSymbolSIPA1L1
Binding site5663,5680
Score1.0
Seed0
Au0.471
Energy-23.0
Binding len17
Me-16.49
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure