Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATGCCATCAATGCATCCAGCTGCAAT
(((((((((.(((((((((((&))))))))..........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386938
GeneSymbolSLCO1A2
Binding site6014,6045
Score0.846
Seed1
Au0.544
Energy-21.4
Binding len31
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure