Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGAGCCGCAGCA
.....(((((((((...((((&))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001386974
GeneSymbolKCNN1
Binding site1054,1070
Score1.0
Seed0
Au0.426
Energy-21.3
Binding len16
Me-14.634
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure