Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCTGCCTCTGTCCAGGTCCTT&GGGGAGGCTGAGGCAGGAG
(((((((((.(((....(((((&)))))))).))))))))).
Details
MiRNAhsa-miR-5001-3p
RefseqIDNM_001387287
GeneSymbolCENPL
Binding site2270,2289
Score1.0
Seed1
Au0.456
Energy-21.7
Binding len19
Me-7.005
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure