Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTTTCTAGGTTGTTGGGG&CCGAGCACGATTGGAAAGGTT
.((((((((((..((((.((.&)).))))...)))))))))).
Details
MiRNAhsa-miR-5003-3p
RefseqIDNM_001387287
GeneSymbolCENPL
Binding site342,363
Score0.846
Seed1
Au0.485
Energy-17.0
Binding len21
Me-8.429
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure