Details of Duplex


2D Structure dot-bracket from RNAduplex"
CTTGGATTTTCCTGGGCCTCAG&CTGAGGCAGGAGAATCG
....(((((((((..(((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5004-3p
RefseqIDNM_001387287
GeneSymbolCENPL
Binding site2277,2294
Score1.0
Seed0
Au0.456
Energy-23.7
Binding len17
Me-11.139
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure