Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCCATGCCTCCTAGAAGTTCC&GGGCTTGGTGGCTCACACCTGTAATTCCAGCACTTTGGGAGGCTGAGGTGGGT
.((((((((((((((.(((...&.))))))))))))....))))).
Details
MiRNAhsa-miR-5581-3p
RefseqIDNM_001387287
GeneSymbolCENPL
Binding site2100,2153
Score0.846
Seed1
Au0.485
Energy-20.3
Binding len23
Me-4.026
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure