Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATGTACATTGGTCAGGTA
(((((((...(((((((.((..&)).)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001352385
GeneSymbolSTK4
Binding site1799,1817
Score1.0
Seed1
Au0.603
Energy-17.7
Binding len18
Me-8.55
Phylopstem-0.2173161857142857
Phylopflank0.5698266249999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure