Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCCAGGTAGCTGCC
..(((((((((((((..((((&)))))))))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352385
GeneSymbolSTK4
Binding site4757,4781
Score0.846
Seed1
Au0.368
Energy-21.5
Binding len24
Me-5.19
Phylopstem0.06670036842105267
Phylopflank-0.16317828575000007
Longest consecutive pairings9
Position of longest consecutive pairings15
Pairings in 3prime end6
Position3UTR
2D Structure