Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGCCGGCAGCTGA
...(((((((((.(((..(((&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352385
GeneSymbolSTK4
Binding site83,100
Score0.846
Seed0
Au0.485
Energy-18.9
Binding len17
Me-7.804
Phylopstem3.8955794
Phylopflank4.1532000625
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure