Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTACAATCGAGACTGCAAT
((((((((.(((((((((...&))))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001352445
GeneSymbolCREM
Binding site2068,2087
Score0.904
Seed1
Au0.647
Energy-19.9
Binding len19
Me-4.994
Phylopstem-0.4314964666666667
Phylopflank-0.0316590325
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure