Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACTGCAATCGCTGGCTGTG
..(((((((((((((((((((&))))..))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001388023
GeneSymbolTRIM66
Binding site990,1013
Score0.885
Seed1
Au0.456
Energy-24.5
Binding len23
Me-4.957
Phylopstem4.871991590909091
Phylopflank5.1792645975
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end8
PositionCDS
2D Structure