Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGCCCTCATCCACCAAAGCTGCTGCAGC
(((((((.((((((((.((((&)))))))))).............)).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001388023
GeneSymbolTRIM66
Binding site2055,2089
Score0.846
Seed1
Au0.324
Energy-23.0
Binding len34
Me-6.251
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings24
Pairings in 3prime end7
PositionCDS
2D Structure