Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGACTGCGACCGCAGCTTCAGC
(((.(((((((((((((.((.&))...))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001388064
GeneSymbolREPIN1
Binding site1594,1617
Score0.923
Seed0
Au0.353
Energy-25.5
Binding len23
Me-6.97
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure